EnhancerDB
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  3. rs142517294[chr6:107162870]
Enhancers that have rs142517294[chr6:107162870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs142517294[chr6:107162870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107162850 107162871 IRF1 JASPAR yes 104060668
chr6 107162855 107162875 RREB1 JASPAR yes 104060669
chr6 107162855 107162876 IRF1 JASPAR yes 104060670
chr6 107162856 107162871 FOXP1 JASPAR yes 104060672
chr6 107162856 107162877 IRF1 JASPAR yes 104060673
chr6 107162857 107162872 STAT2 JASPAR yes 104060674
chr6 107162860 107162872 IRF1 JASPAR yes 104060675
chr6 107162860 107162874 IRF7 JASPAR yes 104060676
chr6 107162861 107162881 RREB1 JASPAR yes 104060677
chr6 107162861 107162882 IRF1 JASPAR yes 104060678
chr6 107162862 107162877 FOXP1 JASPAR yes 104060680
chr6 107162862 107162883 IRF1 JASPAR yes 104060681
chr6 107162863 107162878 STAT2 JASPAR yes 104060682
chr6 107162866 107162878 IRF1 JASPAR yes 104060683
chr6 107162868 107162874 TCF4 TRANSFAC yes 104060684
chr6 107162868 107162883 FOXP1 JASPAR yes 104060685
chr6 107162869 107162880 FOXP2 JASPAR yes 104060686
chr6 107162869 107162881 FOXC2 JASPAR yes 104060687
Genes associated with rs142517294[chr6:107162870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More