EnhancerDB
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  3. rs142519339[chr19:13276822]
Enhancers that have rs142519339[chr19:13276822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142519339[chr19:13276822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13276749 13278878 ZNF274 GTRD no Bone Marrow (K562) 21851103
chr19 13276749 13278878 ZNF274 GTRD no Bone Marrow (K562) 108389509
chr19 13276759 13277547 TCF7L2 GTRD no Colon (HCT116) 21851104
chr19 13276768 13278926 ZBTB33 GTRD no Lung (A549) 108389510
chr19 13276792 13278815 ZNF143 GTRD no Epithelial (MCF-7) 21851105
chr19 13276792 13278815 ZNF143 GTRD no Epithelial (MCF-7) 108389511
chr19 13276811 13276822 FOSL2 JASPAR yes 112514640
Genes associated with rs142519339[chr19:13276822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More