EnhancerDB
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  3. rs142522084[chr1:3264729]
Enhancers that have rs142522084[chr1:3264729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3260385 3279675 enh42858
Liver (HepG2) Epithelial (MCF-7) Large Intestine Ovary Stomach Muscle (A673) Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
chr1 3262093 3266365 vista3
VISTA
Transcript factors that have rs142522084[chr1:3264729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3264716 3264731 TFAP2A JASPAR yes 26282817
chr1 3264716 3264731 TFAP2A JASPAR yes 71118334
chr1 3264717 3264733 GLIS1 JASPAR yes 26282818
chr1 3264717 3264733 GLIS1 JASPAR yes 71118335
chr1 3264718 3264732 GLIS2 JASPAR yes 26282819
chr1 3264718 3264732 GLIS3 JASPAR yes 26282820
chr1 3264718 3264732 GLIS2 JASPAR yes 71118336
chr1 3264718 3264732 GLIS3 JASPAR yes 71118337
chr1 3264719 3264730 TFAP2A JASPAR yes 26282821
chr1 3264719 3264730 TFAP2B JASPAR yes 26282822
chr1 3264719 3264730 TFAP2C JASPAR yes 26282823
chr1 3264719 3264730 TFAP2A JASPAR yes 71118338
chr1 3264719 3264730 TFAP2B JASPAR yes 71118339
chr1 3264719 3264730 TFAP2C JASPAR yes 71118340
chr1 3264719 3264731 TFAP2A JASPAR yes 26282824
chr1 3264719 3264731 TFAP2B JASPAR yes 26282825
chr1 3264719 3264731 TFAP2A JASPAR yes 71118341
chr1 3264719 3264731 TFAP2B JASPAR yes 71118342
chr1 3264720 3264729 TFAP2A JASPAR yes 26282826
chr1 3264720 3264729 TFAP2A JASPAR yes 71118343
Genes associated with rs142522084[chr1:3264729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More