EnhancerDB
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  3. rs142540099[chr2:26287966]
Enhancers that have rs142540099[chr2:26287966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs142540099[chr2:26287966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26287959 26287969 MAX JASPAR yes 72521115
chr2 26287959 26287970 USF1 JASPAR yes 72521116
chr2 26287959 26287970 USF2 JASPAR yes 72521117
chr2 26287960 26287970 TFE3 JASPAR yes 72521118
chr2 26287960 26287970 TFEB JASPAR yes 72521119
Genes associated with rs142540099[chr2:26287966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More