EnhancerDB
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  3. rs142540858[chr10:33424182]
Enhancers that have rs142540858[chr10:33424182]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 33393842 33437095 enh1172
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs142540858[chr10:33424182]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 33423892 33424317 ZNF143 GTRD no Epithelial (MCF-7) 21428597
chr10 33423948 33424455 ZNF143 GTRD no Epithelial (MCF-7) 21428598
chr10 33424164 33424182 NR3C1 JASPAR yes 126575228
chr10 33424182 33424200 SRF JASPAR yes 126575230
Genes associated with rs142540858[chr10:33424182], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More