EnhancerDB
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  3. rs142544023[chr1:23883953]
Enhancers that have rs142544023[chr1:23883953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23868685 23885215 enh126
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142544023[chr1:23883953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23880452 23886457 POLR2A UCSC Txn Factor no Conserved 107802423
chr1 23880452 23886457 POLR2A UCSC Txn Factor no Conserved 107802424
chr1 23883942 23883956 ONECUT3 JASPAR yes 27441732
chr1 23883943 23883954 BATF JASPAR yes 27441733
chr1 23883943 23883957 IRF7 JASPAR yes 27441734
chr1 23883945 23883960 MEF2C JASPAR yes 27441735
Genes associated with rs142544023[chr1:23883953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More