EnhancerDB
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  3. rs142545200[chr1:203625590]
Enhancers that have rs142545200[chr1:203625590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203594185 203628195 enh12562
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142545200[chr1:203625590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203625139 203628299 ZNF274 GTRD no Bone Marrow (K562) 21369748
chr1 203625139 203628299 ZNF274 GTRD no Bone Marrow (K562) 107859243
chr1 203625164 203627219 ZNF143 GTRD no Epithelial (MCF-7) 21369749
chr1 203625164 203627219 ZNF143 GTRD no Epithelial (MCF-7) 107859244
chr1 203625167 203627433 ZNF143 GTRD no Epithelial (MCF-7) 21369750
chr1 203625167 203627433 ZNF143 GTRD no Epithelial (MCF-7) 107859245
chr1 203625584 203625594 RUNX3 JASPAR yes 34651840
chr1 203625585 203625594 RUNX2 JASPAR yes 34651841
Genes associated with rs142545200[chr1:203625590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More