EnhancerDB
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Enhancers that have rs142545977[chr1:234998947]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs142545977[chr1:234998947]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234996665 235000096 ZNF274 GTRD no Cervix (HeLa-S3) 21398973
chr1 234996726 234999316 ZNF143 GTRD no Epithelial (MCF-7) 21398974
chr1 234996739 234998953 ZNF274 GTRD no Liver (HepG2) 21398975
chr1 234996806 234999473 ZNF274 GTRD no Cervix (HeLa-S3) 21398976
chr1 234996877 234999087 ZNF274 GTRD no Liver (HepG2) 21398981
chr1 234996904 234999053 P63 GTRD no Skin (Keratinocyte) 21398983
chr1 234996935 234998973 P63 GTRD no Skin (Keratinocyte) 21398986
chr1 234996990 234999051 ZNF274 GTRD no Cervix (HeLa-S3) 21398999
chr1 234997028 234999077 ZNF274 GTRD no Liver (HepG2) 21399011
chr1 234997062 234999012 ZNF274 GTRD no Liver (HepG2) 21399022
chr1 234998058 234998991 ZNF274 GTRD no Bone Marrow (K562) 21399092
chr1 234998130 234999003 ZNF274 GTRD no Cervix (HeLa-S3) 21399099
chr1 234998163 234999032 ZNF274 GTRD no Liver (HepG2) 21399102
chr1 234998218 234998959 ZNF274 GTRD no Liver (HepG2) 21399106
chr1 234998222 234998964 ZNF143 GTRD no Epithelial (MCF-7) 21399108
chr1 234998251 234999038 ZNF143 GTRD no Epithelial (MCF-7) 21399109
chr1 234998298 234998948 ZNF274 GTRD no Bone Marrow (K562) 21399115
chr1 234998309 234999265 ZNF274 GTRD no Bone Marrow (K562) 21399118
chr1 234998926 234998947 ZNF263 JASPAR yes 36322484
Genes associated with rs142545977[chr1:234998947], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More