EnhancerDB
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  3. rs142561749[chr2:28857162]
Enhancers that have rs142561749[chr2:28857162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142561749[chr2:28857162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28857154 28857175 IRF1 JASPAR yes 72661857
chr2 28857157 28857171 SPI1 JASPAR yes 72661859
Genes associated with rs142561749[chr2:28857162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More