EnhancerDB
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  3. rs142566490[chr1:27363552]
Enhancers that have rs142566490[chr1:27363552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27351515 27365695 enh11658
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs142566490[chr1:27363552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27363547 27363553 SP1 TRANSFAC yes 27671555
chr1 27363548 27363553 SP1 TRANSFAC yes 27671556
chr1 27363549 27363554 SP1 TRANSFAC yes 27671557
chr1 27363549 27363558 THAP1 JASPAR yes 27671558
chr1 27363552 27363556 LFA1 TRANSFAC yes 27671559
Genes associated with rs142566490[chr1:27363552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More