EnhancerDB
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  3. rs142609882[chr1:22346422]
Enhancers that have rs142609882[chr1:22346422]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22343446 22360375 enh116
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Stomach
Transcript factors that have rs142609882[chr1:22346422]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22346415 22346433 RARA JASPAR yes 27338416
chr1 22346416 22346427 ESRRA JASPAR yes 27338417
chr1 22346416 22346427 ESRRB JASPAR yes 27338418
chr1 22346417 22346425 NR4A2 JASPAR yes 27338419
chr1 22346418 22346428 RORA JASPAR yes 27338420
Genes associated with rs142609882[chr1:22346422], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More