EnhancerDB
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  3. rs142639676[chr17:62169730]
Enhancers that have rs142639676[chr17:62169730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 62169387 62169789 vista25507
VISTA
Transcript factors that have rs142639676[chr17:62169730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62169081 62172052 ZNF143 GTRD no Epithelial (MCF-7) 21778634
chr17 62169081 62172052 ZNF143 GTRD no Epithelial (MCF-7) 108282259
chr17 62169532 62169808 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108282261
chr17 62169538 62169868 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108282262
chr17 62169667 62172017 ZNF143 GTRD no Epithelial (MCF-7) 21778636
chr17 62169667 62172017 ZNF143 GTRD no Epithelial (MCF-7) 108282263
chr17 62169690 62174645 ZNF274 GTRD no Bone Marrow (K562) 108282264
chr17 62169690 62174645 ZNF274 GTRD no Bone Marrow (K562) 108282265
chr17 62169712 62170974 ZNF274 GTRD no Bone Marrow (K562) 108282266
chr17 62169718 62174465 ZNF274 GTRD no Bone Marrow (K562) 108282267
chr17 62169725 62169735 BHLHE40 JASPAR yes 21273425
chr17 62169725 62169735 BHLHE41 JASPAR yes 21273426
chr17 62169725 62169735 SREBF2 JASPAR yes 21273427
chr17 62169725 62169735 TFE3 JASPAR yes 21273428
chr17 62169725 62169735 TFEC JASPAR yes 21273429
chr17 62169725 62169735 BHLHE40 JASPAR yes 55276580
chr17 62169725 62169735 BHLHE41 JASPAR yes 55276581
chr17 62169725 62169735 SREBF2 JASPAR yes 55276582
chr17 62169725 62169735 TFE3 JASPAR yes 55276583
chr17 62169725 62169735 TFEC JASPAR yes 55276584
chr17 62169727 62169732 MYC TRANSFAC yes 21273430
chr17 62169727 62169732 USF1 TRANSFAC yes 21273431
chr17 62169727 62169732 USF2 TRANSFAC yes 21273432
chr17 62169727 62169732 MYC TRANSFAC yes 55276585
chr17 62169727 62169732 USF1 TRANSFAC yes 55276586
chr17 62169727 62169732 USF2 TRANSFAC yes 55276587
Genes associated with rs142639676[chr17:62169730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More