EnhancerDB
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  3. rs142661210[chr1:27858283]
Enhancers that have rs142661210[chr1:27858283]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142661210[chr1:27858283]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27858269 27858284 TFAP2A JASPAR yes 27705983
chr1 27858269 27858284 TFAP2C JASPAR yes 27705984
chr1 27858271 27858286 TFAP2A JASPAR yes 27705985
chr1 27858272 27858283 TFAP2A JASPAR yes 27705986
chr1 27858272 27858283 TFAP2B JASPAR yes 27705987
chr1 27858272 27858283 TFAP2C JASPAR yes 27705988
chr1 27858279 27858284 ETS2 TRANSFAC yes 27705989
Genes associated with rs142661210[chr1:27858283], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More