EnhancerDB
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  3. rs142707668[chr16:89393186]
Enhancers that have rs142707668[chr16:89393186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142707668[chr16:89393186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89392276 89393297 ZNF274 GTRD no Blood (GM12878) 21738207
chr16 89392276 89393297 ZNF274 GTRD no Blood (GM12878) 108225660
chr16 89392996 89393316 ZNF274 GTRD no Blood (GM12878) 21738243
chr16 89392996 89393316 ZNF274 GTRD no Blood (GM12878) 108225701
chr16 89393166 89393186 RREB1 JASPAR yes 12331632
chr16 89393167 89393187 RREB1 JASPAR yes 12331633
chr16 89393186 89393190 LFA1 TRANSFAC yes 12331637
Genes associated with rs142707668[chr16:89393186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More