EnhancerDB
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  3. rs142717841[chr1:25053727]
Enhancers that have rs142717841[chr1:25053727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142717841[chr1:25053727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25053706 25053727 ZNF263 JASPAR yes 27523822
chr1 25053708 25053729 ZNF263 JASPAR yes 27523823
chr1 25053709 25053730 IRF1 JASPAR yes 27523824
chr1 25053710 25053731 ZNF263 JASPAR yes 27523825
chr1 25053712 25053733 ZNF263 JASPAR yes 27523827
chr1 25053715 25053730 PRDM1 JASPAR yes 27523830
chr1 25053719 25053734 PRDM1 JASPAR yes 27523831
chr1 25053719 25053740 ZNF263 JASPAR yes 27523832
chr1 25053721 25053742 IRF1 JASPAR yes 27523833
chr1 25053722 25053743 ZNF263 JASPAR yes 27523834
chr1 25053723 25053738 PRDM1 JASPAR yes 27523835
chr1 25053725 25053746 ZNF263 JASPAR yes 27523836
Genes associated with rs142717841[chr1:25053727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More