EnhancerDB
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  3. rs142720467[chr12:52595404]
Enhancers that have rs142720467[chr12:52595404]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 52595153 52595538 vista13463
VISTA
Transcript factors that have rs142720467[chr12:52595404]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52595394 52595405 DUX4 JASPAR yes 82406453
chr12 52595394 52595405 DUX4 JASPAR yes 120927131
chr12 52595397 52595407 GSC2 JASPAR yes 82406454
chr12 52595397 52595407 GSC JASPAR yes 82406455
chr12 52595397 52595407 GSC2 JASPAR yes 120927132
chr12 52595397 52595407 GSC JASPAR yes 120927133
chr12 52595398 52595406 OTX1 JASPAR yes 82406456
chr12 52595398 52595406 OTX2 JASPAR yes 82406457
chr12 52595398 52595406 RHOXF1 JASPAR yes 82406458
chr12 52595398 52595406 OTX1 JASPAR yes 120927134
chr12 52595398 52595406 OTX2 JASPAR yes 120927135
chr12 52595398 52595406 RHOXF1 JASPAR yes 120927136
chr12 52595398 52595407 PITX3 JASPAR yes 82406459
chr12 52595398 52595407 PITX3 JASPAR yes 120927137
Genes associated with rs142720467[chr12:52595404], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More