EnhancerDB
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  3. rs142747008[chr2:28943808]
Enhancers that have rs142747008[chr2:28943808]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs142747008[chr2:28943808]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28943792 28943813 IRF1 JASPAR yes 72673657
chr2 28943796 28943811 PRDM1 JASPAR yes 72673658
chr2 28943796 28943814 IRF2 JASPAR yes 72673659
Genes associated with rs142747008[chr2:28943808], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More