EnhancerDB
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  3. rs142760944[chr19:2600116]
Enhancers that have rs142760944[chr19:2600116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2585524 2605695 enh17851
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs142760944[chr19:2600116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2598526 2600417 ZNF274 GTRD no Blood (GM12878) 21837510
chr19 2598526 2600417 ZNF274 GTRD no Blood (GM12878) 108362963
chr19 2598555 2600180 ZNF274 GTRD no Blood (GM12878) 21837515
chr19 2598555 2600180 ZNF274 GTRD no Blood (GM12878) 108362968
chr19 2598652 2600564 ZNF274 GTRD no Blood (GM12878) 21837522
chr19 2598652 2600564 ZNF274 GTRD no Blood (GM12878) 108362976
chr19 2598878 2600125 TCF7L2 GTRD no Colon (HCT116) 108363094
chr19 2598909 2600161 TCF7L2 GTRD no Colon (HCT116) 108363112
chr19 2600105 2600116 HOXA10 JASPAR yes 112080780
chr19 2600105 2600116 HOXC12 JASPAR yes 112080781
chr19 2600106 2600116 HOXA13 JASPAR yes 112080783
chr19 2600106 2600116 HOXB13 JASPAR yes 112080784
chr19 2600106 2600116 HOXC10 JASPAR yes 112080785
chr19 2600106 2600116 HOXD13 JASPAR yes 112080786
chr19 2600106 2600122 POU4F3 JASPAR yes 112080787
chr19 2600108 2600122 POU4F1 JASPAR yes 112080788
chr19 2600108 2600123 HNF1A JASPAR yes 112080789
chr19 2600110 2600116 TBP TRANSFAC yes 112080790
Genes associated with rs142760944[chr19:2600116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More