EnhancerDB
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  3. rs142773595[chr1:212088191]
Enhancers that have rs142773595[chr1:212088191]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs142773595[chr1:212088191]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212087915 212088326 ZNF274 GTRD no Bone Marrow (K562) 21377489
chr1 212088080 212088976 ZNF143 GTRD no Epithelial (MCF-7) 21377490
chr1 212088088 212088731 ZNF274 GTRD no Liver (HepG2) 21377491
chr1 212088109 212088978 ZNF143 GTRD no Epithelial (MCF-7) 21377492
chr1 212088115 212088627 ZNF274 GTRD no Cervix (HeLa-S3) 21377493
chr1 212088130 212089046 ZNF143 GTRD no Epithelial (MCF-7) 21377494
chr1 212088170 212088969 ZNF143 GTRD no Epithelial (MCF-7) 21377495
chr1 212088186 212088196 SP1 JASPAR yes 35090741
chr1 212088189 212088194 SP1 TRANSFAC yes 35090742
Genes associated with rs142773595[chr1:212088191], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More