EnhancerDB
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  3. rs142782073[chr16:87807878]
Enhancers that have rs142782073[chr16:87807878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs142782073[chr16:87807878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87805639 87808173 ZNF143 GTRD no Epithelial (MCF-7) 21733716
chr16 87805639 87808173 ZNF143 GTRD no Epithelial (MCF-7) 108219694
chr16 87805714 87807906 ZNF274 GTRD no Blood (GM12878) 21733724
chr16 87805714 87807906 ZNF274 GTRD no Blood (GM12878) 108219701
chr16 87805751 87807918 ZBTB33 GTRD no Lung (A549) 108219708
chr16 87805813 87809870 ZNF143 GTRD no Epithelial (MCF-7) 21733736
chr16 87805813 87809870 ZNF143 GTRD no Epithelial (MCF-7) 108219716
chr16 87805816 87807982 ZNF143 GTRD no Epithelial (MCF-7) 21733737
chr16 87805816 87807982 ZNF143 GTRD no Epithelial (MCF-7) 108219717
chr16 87805844 87807975 ZNF274 GTRD no Cervix (HeLa-S3) 21733739
chr16 87805844 87807975 ZNF274 GTRD no Cervix (HeLa-S3) 108219719
chr16 87805899 87807949 ZBTB33 GTRD no Lung (A549) 108219723
chr16 87806065 87807929 ZNF274 GTRD no Cervix (HeLa-S3) 21733763
chr16 87806065 87807929 ZNF274 GTRD no Cervix (HeLa-S3) 108219742
chr16 87806141 87808690 STAT3 GTRD no Blood (OCI-LY7) 21733784
chr16 87806141 87808690 STAT3 GTRD no Blood (OCI-LY7) 108219759
chr16 87806479 87807934 ZNF143 GTRD no Epithelial (MCF-7) 21733820
chr16 87806479 87807934 ZNF143 GTRD no Epithelial (MCF-7) 108219797
chr16 87807869 87807881 PROX1 JASPAR yes 12237409
Genes associated with rs142782073[chr16:87807878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More