EnhancerDB
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  3. rs142804637[chr17:49038042]
Enhancers that have rs142804637[chr17:49038042]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142804637[chr17:49038042]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49038029 49038044 SCRT1 JASPAR yes 54739618
chr17 49038032 49038044 PKNOX1 JASPAR yes 54739620
chr17 49038032 49038044 PKNOX2 JASPAR yes 54739621
chr17 49038032 49038044 TGIF1 JASPAR yes 54739622
chr17 49038032 49038044 TGIF2 JASPAR yes 54739623
chr17 49038033 49038042 SNAI2 JASPAR yes 54739624
chr17 49038033 49038043 FIGLA JASPAR yes 54739625
chr17 49038033 49038043 ID4 JASPAR yes 54739626
chr17 49038033 49038043 MSC JASPAR yes 54739627
chr17 49038033 49038043 MYF6 JASPAR yes 54739628
chr17 49038033 49038043 TCF3 JASPAR yes 54739629
chr17 49038033 49038043 TCF4 JASPAR yes 54739630
chr17 49038035 49038044 ZEB1 JASPAR yes 54739631
chr17 49038035 49038045 TBX21 JASPAR yes 54739632
chr17 49038035 49038576 TCF7L2 GTRD no Colon (HCT116) 21771973
chr17 49038036 49038044 MGA JASPAR yes 54739633
chr17 49038036 49038044 TBX15 JASPAR yes 54739634
chr17 49038036 49038044 TBX1 JASPAR yes 54739635
chr17 49038036 49038044 TBX4 JASPAR yes 54739636
chr17 49038036 49038044 TBX5 JASPAR yes 54739637
chr17 49038036 49038046 TBR1 JASPAR yes 54739638
chr17 49038036 49038049 SMAD2 JASPAR yes 54739639
Genes associated with rs142804637[chr17:49038042], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More