EnhancerDB
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  3. rs142827471[chr1:225648776]
Enhancers that have rs142827471[chr1:225648776]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142827471[chr1:225648776]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225648736 225649207 ZNF274 GTRD no Bone Marrow (K562) 21384810
chr1 225648767 225648786 CTCF JASPAR yes 35743324
chr1 225648768 225648783 ZIC3 JASPAR yes 35743325
chr1 225648768 225648783 ZIC4 JASPAR yes 35743326
chr1 225648769 225648783 ZIC1 JASPAR yes 35743327
chr1 225648775 225648796 ZNF263 JASPAR yes 35743328
Genes associated with rs142827471[chr1:225648776], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More