EnhancerDB
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  3. rs142858510[chr17:41525376]
Enhancers that have rs142858510[chr17:41525376]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs142858510[chr17:41525376]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41520571 41526147 ZNF143 GTRD no Epithelial (MCF-7) 21760302
chr17 41520594 41525787 ZNF143 GTRD no Epithelial (MCF-7) 21760304
chr17 41520863 41526178 ZNF143 GTRD no Epithelial (MCF-7) 21760316
chr17 41523624 41525585 ZNF143 GTRD no Epithelial (MCF-7) 21760408
chr17 41523647 41525933 ZNF143 GTRD no Epithelial (MCF-7) 21760411
chr17 41523660 41526159 ZNF143 GTRD no Epithelial (MCF-7) 21760413
chr17 41524031 41525848 ZNF143 GTRD no Epithelial (MCF-7) 21760423
chr17 41524731 41526126 ZNF143 GTRD no Epithelial (MCF-7) 21760428
chr17 41524772 41525645 ZNF143 GTRD no Epithelial (MCF-7) 21760429
chr17 41525061 41526146 ZNF143 GTRD no Epithelial (MCF-7) 21760430
chr17 41525223 41526068 ZNF143 GTRD no Epithelial (MCF-7) 21760431
chr17 41525246 41526332 ZNF143 GTRD no Epithelial (MCF-7) 21760432
chr17 41525255 41526073 ZNF143 GTRD no Epithelial (MCF-7) 21760433
chr17 41525258 41526095 ZNF143 GTRD no Epithelial (MCF-7) 21760434
chr17 41525313 41526291 ZNF143 GTRD no Epithelial (MCF-7) 21760435
chr17 41525325 41526173 ZNF143 GTRD no Epithelial (MCF-7) 21760436
chr17 41525370 41525385 MEF2A JASPAR yes 54347881
chr17 41525371 41525386 MEF2C JASPAR yes 54347882
chr17 41525371 41525392 IRF1 JASPAR yes 54347883
chr17 41525372 41525384 MEF2A JASPAR yes 54347884
chr17 41525372 41525384 MEF2B JASPAR yes 54347885
chr17 41525372 41525384 MEF2D JASPAR yes 54347886
chr17 41525372 41525385 POU3F3 JASPAR yes 54347887
chr17 41525373 41525383 MEF2A JASPAR yes 54347888
chr17 41525374 41525378 YY1 TRANSFAC yes 54347889
chr17 41525375 41525387 IRF1 JASPAR yes 54347890
chr17 41525375 41525389 IRF7 JASPAR yes 54347891
Genes associated with rs142858510[chr17:41525376], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More