EnhancerDB
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  3. rs142881340[chr1:226953309]
Enhancers that have rs142881340[chr1:226953309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226946305 226956154 enh12730
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Astrocyte Lung (A549) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Uterus Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs142881340[chr1:226953309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226953253 226953569 ZNF143 GTRD no Epithelial (MCF-7) 21387325
chr1 226953295 226953310 PRDM1 JASPAR yes 35841403
chr1 226953297 226953312 MEF2C JASPAR yes 35841404
chr1 226953298 226953313 MEF2A JASPAR yes 35841405
chr1 226953299 226953311 MEF2A JASPAR yes 35841406
chr1 226953301 226953315 FOXF2 JASPAR yes 35841407
chr1 226953301 226953316 FOXP1 JASPAR yes 35841408
chr1 226953302 226953313 FOXA1 JASPAR yes 35841409
chr1 226953302 226953317 FOXA1 JASPAR yes 35841410
chr1 226953303 226953314 FOXB1 JASPAR yes 35841411
chr1 226953303 226953314 FOXC1 JASPAR yes 35841412
chr1 226953303 226953315 FOXC2 JASPAR yes 35841413
chr1 226953304 226953315 FOXP2 JASPAR yes 35841414
chr1 226953304 226953316 FOXI1 JASPAR yes 35841415
chr1 226953306 226953314 FOXG1 JASPAR yes 35841416
chr1 226953306 226953314 FOXO3 JASPAR yes 35841417
Genes associated with rs142881340[chr1:226953309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More