EnhancerDB
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  3. rs142899407[chr1:229228690]
Enhancers that have rs142899407[chr1:229228690]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs142899407[chr1:229228690]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229228672 229229008 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389896
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 21389897
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 107877686
chr1 229228683 229228697 STAT1 JASPAR yes 35959194
chr1 229228687 229228692 ETS2 TRANSFAC yes 35959195
chr1 229228689 229228698 SRY JASPAR yes 35959196
chr1 229228689 229228707 NR3C1 JASPAR yes 35959197
Genes associated with rs142899407[chr1:229228690], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More