EnhancerDB
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  3. rs142942507[chr1:223901842]
Enhancers that have rs142942507[chr1:223901842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142942507[chr1:223901842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223899892 223901978 POLR2A UCSC Txn Factor no Conserved 107873036
chr1 223901514 223901978 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21383861
chr1 223901514 223901978 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107873041
chr1 223901837 223901843 MZF1 JASPAR yes 35671369
Genes associated with rs142942507[chr1:223901842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More