EnhancerDB
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  3. rs142943732[chr17:48293591]
Enhancers that have rs142943732[chr17:48293591]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142943732[chr17:48293591]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48293413 48294763 ZBTB33 GTRD no Lung (A549) 21769663
chr17 48293413 48294763 ZBTB33 GTRD no Lung (A549) 108270692
chr17 48293531 48294658 ZBTB33 GTRD no Lung (A549) 21769664
chr17 48293531 48294658 ZBTB33 GTRD no Lung (A549) 108270693
chr17 48293582 48293592 GSC2 JASPAR yes 54688024
chr17 48293582 48293592 GSC JASPAR yes 54688025
chr17 48293583 48293591 OTX1 JASPAR yes 54688026
chr17 48293583 48293592 PITX3 JASPAR yes 54688027
chr17 48293591 48293599 TBX5 JASPAR yes 54688028
Genes associated with rs142943732[chr17:48293591], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 47572655 47592379 + NGFR ENSG00000064300.4 47572655 701212 Esophagus 0.387059 16015