EnhancerDB
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  3. rs142950048[chr19:13288301]
Enhancers that have rs142950048[chr19:13288301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142950048[chr19:13288301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13288293 13288303 SP1 JASPAR yes 112516388
chr19 13288299 13288310 FOSL2 JASPAR yes 112516389
chr19 13288301 13288314 SMAD2 JASPAR yes 112516390
Genes associated with rs142950048[chr19:13288301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More