EnhancerDB
  1. Home
  2. SNP
  3. rs142955154[chr16:29280936]
Enhancers that have rs142955154[chr16:29280936]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs142955154[chr16:29280936]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29280630 29280986 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702079
chr16 29280851 29281141 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702080
chr16 29280873 29281129 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21702081
chr16 29280879 29281203 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21702082
chr16 29280900 29281100 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702083
chr16 29280903 29281147 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702084
chr16 29280934 29280947 SMAD2 JASPAR yes 10256165
Genes associated with rs142955154[chr16:29280936], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More