EnhancerDB
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  3. rs142959672[chr1:178625923]
Enhancers that have rs142959672[chr1:178625923]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs142959672[chr1:178625923]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178625563 178626444 ZNF274 GTRD no Liver (HepG2) 21352845
chr1 178625569 178626347 ZNF274 GTRD no Liver (HepG2) 21352846
chr1 178625614 178626342 ZNF274 GTRD no Liver (HepG2) 21352847
chr1 178625641 178626256 ZNF274 GTRD no Liver (HepG2) 21352848
chr1 178625664 178626386 ZNF274 GTRD no Liver (HepG2) 21352849
chr1 178625685 178626202 ZNF274 GTRD no Liver (HepG2) 21352850
chr1 178625696 178626155 ZNF274 GTRD no Liver (HepG2) 21352851
chr1 178625721 178626192 ZNF274 GTRD no Liver (HepG2) 21352852
chr1 178625727 178626141 ZNF274 GTRD no Liver (HepG2) 21352853
chr1 178625794 178626155 ZNF274 GTRD no Liver (HepG2) 21352854
chr1 178625821 178626256 ZNF274 GTRD no Liver (HepG2) 21352855
chr1 178625921 178625937 ZNF143 JASPAR yes 33434499
chr1 178625923 178625938 RUNX2 JASPAR yes 33434500
Genes associated with rs142959672[chr1:178625923], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More