EnhancerDB
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  3. rs142969620[chr1:227011452]
Enhancers that have rs142969620[chr1:227011452]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142969620[chr1:227011452]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227011409 227011633 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387709
chr1 227011429 227011602 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387710
chr1 227011445 227011456 E2F4 JASPAR yes 35848541
chr1 227011445 227011456 E2F6 JASPAR yes 35848542
chr1 227011446 227011457 E2F1 JASPAR yes 35848543
chr1 227011449 227011456 SP1 TRANSFAC yes 35848544
chr1 227011450 227011455 SP1 TRANSFAC yes 35848545
chr1 227011450 227011456 SP1 TRANSFAC yes 35848546
Genes associated with rs142969620[chr1:227011452], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More