EnhancerDB
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  3. rs142971200[chr2:23642118]
Enhancers that have rs142971200[chr2:23642118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 23632492 23662135 enh18338
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs142971200[chr2:23642118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 23642108 23642118 SP1 JASPAR yes 72361342
chr2 23642109 23642124 TFAP2A JASPAR yes 72361343
chr2 23642109 23642124 TFAP2C JASPAR yes 72361344
Genes associated with rs142971200[chr2:23642118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More