EnhancerDB
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  3. rs142988229[chr16:14455426]
Enhancers that have rs142988229[chr16:14455426]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14436207 14505799 enh3905
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs142988229[chr16:14455426]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14455198 14456214 ZNF274 GTRD no Cervix (HeLa-S3) 21692752
chr16 14455269 14456156 ZNF274 GTRD no Cervix (HeLa-S3) 21692753
chr16 14455274 14456355 TCF7L2 GTRD no Colon (HCT116) 21692754
chr16 14455366 14456139 ZNF274 GTRD no Cervix (HeLa-S3) 21692755
chr16 14455418 14456033 ZNF274 GTRD no Cervix (HeLa-S3) 21692756
chr16 14455420 14455430 MAX JASPAR yes 9688911
chr16 14455420 14455431 USF1 JASPAR yes 9688912
chr16 14455420 14455431 USF2 JASPAR yes 9688913
chr16 14455421 14455431 BHLHE40 JASPAR yes 9688914
chr16 14455421 14455431 BHLHE41 JASPAR yes 9688915
chr16 14455421 14455431 MLXIPL JASPAR yes 9688916
chr16 14455421 14455431 MLX JASPAR yes 9688917
chr16 14455421 14455431 SREBF2 JASPAR yes 9688918
chr16 14455421 14455431 TFE3 JASPAR yes 9688919
chr16 14455421 14455431 TFEB JASPAR yes 9688920
chr16 14455421 14455431 TFEC JASPAR yes 9688921
chr16 14455421 14455432 USF2 JASPAR yes 9688922
chr16 14455422 14455437 JUND JASPAR yes 9688923
chr16 14455423 14455428 MYC TRANSFAC yes 9688924
chr16 14455423 14455428 USF1 TRANSFAC yes 9688925
chr16 14455423 14455428 USF2 TRANSFAC yes 9688926
chr16 14455426 14455439 JUN JASPAR yes 9688927
Genes associated with rs142988229[chr16:14455426], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More