EnhancerDB
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  3. rs143006871[chr17:43450305]
Enhancers that have rs143006871[chr17:43450305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43440002 43455235 enh17189
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs143006871[chr17:43450305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43448448 43450395 ZNF274 GTRD no Liver (HepG2) 108264888
chr17 43448452 43450457 ZNF274 GTRD no Liver (HepG2) 108264889
chr17 43448575 43450445 ZBTB33 GTRD no Lung (A549) 108264890
chr17 43448610 43450427 ZBTB33 GTRD no Lung (A549) 108264891
chr17 43448633 43450492 ZBTB33 GTRD no Lung (A549) 108264892
chr17 43448663 43450451 ZNF274 GTRD no Liver (HepG2) 108264893
chr17 43448668 43450428 ZNF274 GTRD no Liver (HepG2) 108264894
chr17 43448686 43450329 ZNF274 GTRD no Liver (HepG2) 108264896
chr17 43448708 43450343 ZNF274 GTRD no Liver (HepG2) 108264898
chr17 43448734 43450420 ZNF274 GTRD no Liver (HepG2) 108264899
chr17 43448807 43450333 ZNF274 GTRD no Liver (HepG2) 108264902
chr17 43448810 43450325 ZBTB33 GTRD no Lung (A549) 108264903
chr17 43448852 43450404 ZNF274 GTRD no Liver (HepG2) 108264904
chr17 43448944 43450323 ZNF274 GTRD no Liver (HepG2) 108264924
chr17 43448970 43450322 ZNF274 GTRD no Liver (HepG2) 108264935
chr17 43449049 43450385 ZNF274 GTRD no Liver (HepG2) 108264967
chr17 43449050 43450310 TEF1 GTRD no Bone (Osteoblast) 21765552
chr17 43449050 43450310 TEF1 GTRD no Bone (Osteoblast) 108264969
chr17 43449162 43450390 ZBTB33 GTRD no Lung (A549) 108265013
chr17 43450294 43450305 CEBPB JASPAR yes 54450032
Genes associated with rs143006871[chr17:43450305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More