EnhancerDB
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  3. rs143053942[chr17:59400244]
Enhancers that have rs143053942[chr17:59400244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143053942[chr17:59400244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59396443 59400405 ZNF143 GTRD no Epithelial (MCF-7) 21777324
chr17 59396443 59400405 ZNF143 GTRD no Epithelial (MCF-7) 108279396
chr17 59400228 59400249 ZNF263 JASPAR yes 55148332
chr17 59400230 59400251 ZNF263 JASPAR yes 55148333
chr17 59400240 59400254 GLIS2 JASPAR yes 55148334
chr17 59400240 59400254 GLIS3 JASPAR yes 55148335
chr17 59400243 59400248 SP1 TRANSFAC yes 55148336
chr17 59400244 59400254 ZNF740 JASPAR yes 55148337
chr17 59400244 59400256 ZBTB7B JASPAR yes 55148338
Genes associated with rs143053942[chr17:59400244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More