EnhancerDB
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  3. rs143056519[chr15:40378407]
Enhancers that have rs143056519[chr15:40378407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143056519[chr15:40378407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40378388 40378407 RFX2 JASPAR yes 22928541
chr15 40378392 40378408 RFX3 JASPAR yes 22928543
chr15 40378392 40378408 RFX4 JASPAR yes 22928544
chr15 40378392 40378408 RFX5 JASPAR yes 22928545
chr15 40378393 40378412 RFX2 JASPAR yes 22928546
Genes associated with rs143056519[chr15:40378407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More