EnhancerDB
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  3. rs143063052[chr1:19273599]
Enhancers that have rs143063052[chr1:19273599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143063052[chr1:19273599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19271677 19273824 TCF7L2 GTRD no Colon (HCT116) 107802286
chr1 19273598 19273610 IRF1 JASPAR yes 27164842
Genes associated with rs143063052[chr1:19273599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More