EnhancerDB
  1. Home
  2. SNP
  3. rs143071568[chr1:10451190]
Enhancers that have rs143071568[chr1:10451190]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10444465 10451875 enh57
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs143071568[chr1:10451190]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10451187 10451198 USF1 JASPAR yes 26714902
chr1 10451187 10451198 USF2 JASPAR yes 26714903
chr1 10451188 10451198 SREBF2 JASPAR yes 26714904
chr1 10451190 10451195 USF2 TRANSFAC yes 26714905
Genes associated with rs143071568[chr1:10451190], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More