EnhancerDB
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  3. rs143076017[chr6:33578326]
Enhancers that have rs143076017[chr6:33578326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs143076017[chr6:33578326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33578312 33578328 RFX2 JASPAR yes 101160895
chr6 33578312 33578328 RFX3 JASPAR yes 101160896
chr6 33578312 33578328 RFX5 JASPAR yes 101160897
chr6 33578326 33578347 REST JASPAR yes 101160898
Genes associated with rs143076017[chr6:33578326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More