EnhancerDB
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  3. rs143080204[chr1:203622859]
Enhancers that have rs143080204[chr1:203622859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203594185 203628195 enh12562
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143080204[chr1:203622859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203622492 203623646 ZNF274 GTRD no Bone Marrow (K562) 21369736
chr1 203622492 203623646 ZNF274 GTRD no Bone Marrow (K562) 107859228
chr1 203622506 203622916 ZBTB33 GTRD no Brain (SK-N-SH) 21369737
chr1 203622506 203622916 ZBTB33 GTRD no Brain (SK-N-SH) 107859229
chr1 203622517 203623152 ZNF274 GTRD no Bone Marrow (K562) 21369738
chr1 203622517 203623152 ZNF274 GTRD no Bone Marrow (K562) 107859230
chr1 203622853 203622868 MEF2A JASPAR yes 34651468
chr1 203622854 203622869 MEF2C JASPAR yes 34651469
chr1 203622855 203622867 MEF2A JASPAR yes 34651470
chr1 203622855 203622867 MEF2B JASPAR yes 34651471
chr1 203622855 203622867 MEF2D JASPAR yes 34651472
chr1 203622856 203622866 MEF2A JASPAR yes 34651473
chr1 203622857 203622861 YY1 TRANSFAC yes 34651474
Genes associated with rs143080204[chr1:203622859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More