EnhancerDB
  1. Home
  2. SNP
  3. rs143129243[chr1:178623803]
Enhancers that have rs143129243[chr1:178623803]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs143129243[chr1:178623803]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178623797 178623808 USF1 JASPAR yes 33434094
chr1 178623797 178623808 USF2 JASPAR yes 33434095
chr1 178623798 178623808 SREBF2 JASPAR yes 33434096
chr1 178623800 178623805 USF2 TRANSFAC yes 33434097
chr1 178623803 178623816 NR2F1 JASPAR yes 33434098
Genes associated with rs143129243[chr1:178623803], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More