EnhancerDB
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  3. rs143143342[chr1:209594036]
Enhancers that have rs143143342[chr1:209594036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs143143342[chr1:209594036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209593494 209594375 ZNF274 GTRD no Cervix (HeLa-S3) 21375397
chr1 209593856 209594909 ZNF143 GTRD no Epithelial (MCF-7) 21375398
chr1 209593873 209594070 ZNF143 GTRD no Epithelial (MCF-7) 21375399
chr1 209593875 209594055 ZNF274 GTRD no Cervix (HeLa-S3) 21375400
chr1 209593877 209594064 ZNF143 GTRD no Epithelial (MCF-7) 21375401
chr1 209593909 209594280 ZBTB33 GTRD no Lung (A549) 21375402
chr1 209594027 209594040 ELF3 JASPAR yes 34974327
chr1 209594036 209594048 TEF JASPAR yes 34974328
Genes associated with rs143143342[chr1:209594036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More