EnhancerDB
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  3. rs143158172[chr17:27220328]
Enhancers that have rs143158172[chr17:27220328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27212385 27223219 enh4317
Skin (Keratinocyte) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach
Transcript factors that have rs143158172[chr17:27220328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27219919 27220330 ZNF274 GTRD no Liver (HepG2) 108246330
chr17 27219924 27220360 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748718
chr17 27219924 27220360 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108246331
chr17 27219937 27220437 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748720
chr17 27219937 27220437 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108246333
chr17 27219939 27220411 ZNF274 GTRD no Liver (HepG2) 108246334
chr17 27220019 27220399 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748722
chr17 27220019 27220399 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108246336
chr17 27220019 27220455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748723
chr17 27220019 27220455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108246337
chr17 27220312 27220332 RREB1 JASPAR yes 53702078
Genes associated with rs143158172[chr17:27220328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More