EnhancerDB
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  3. rs143159840[chr1:27923498]
Enhancers that have rs143159840[chr1:27923498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs143159840[chr1:27923498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27923479 27923499 TP53 JASPAR yes 27714230
chr1 27923488 27923503 FOXA1 JASPAR yes 27714234
chr1 27923490 27923502 FOXC2 JASPAR yes 27714235
chr1 27923491 27923499 FOXG1 JASPAR yes 27714236
chr1 27923491 27923502 FOXB1 JASPAR yes 27714237
chr1 27923491 27923502 FOXC1 JASPAR yes 27714238
Genes associated with rs143159840[chr1:27923498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More