EnhancerDB
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  3. rs143178954[chr11:62235406]
Enhancers that have rs143178954[chr11:62235406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62190145 62243455 enh13972
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143178954[chr11:62235406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62235393 62235406 ELF1 JASPAR yes 39204934
chr11 62235401 62235415 GATA2 JASPAR yes 39204938
chr11 62235405 62235413 GATA3 JASPAR yes 39204939
chr11 62235405 62235413 GATA5 JASPAR yes 39204940
Genes associated with rs143178954[chr11:62235406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More