EnhancerDB
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  3. rs143313774[chr17:41526850]
Enhancers that have rs143313774[chr17:41526850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs143313774[chr17:41526850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41526227 41528797 ZNF143 GTRD no Epithelial (MCF-7) 21760440
chr17 41526271 41528845 ZNF143 GTRD no Epithelial (MCF-7) 21760441
chr17 41526397 41526852 ZNF143 GTRD no Epithelial (MCF-7) 21760442
chr17 41526422 41528904 ZNF143 GTRD no Epithelial (MCF-7) 21760443
chr17 41526590 41528944 ZNF143 GTRD no Epithelial (MCF-7) 21760446
chr17 41526648 41528930 ZNF143 GTRD no Epithelial (MCF-7) 21760447
chr17 41526659 41528889 ZNF143 GTRD no Epithelial (MCF-7) 21760448
chr17 41526714 41528825 ZNF274 GTRD no Liver (HepG2) 21760449
chr17 41526734 41528838 ZNF274 GTRD no Cervix (HeLa-S3) 21760450
chr17 41526767 41528900 ZNF143 GTRD no Epithelial (MCF-7) 21760451
chr17 41526772 41527108 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760452
chr17 41526777 41527321 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760453
chr17 41526780 41527159 ZNF143 GTRD no Epithelial (MCF-7) 21760454
chr17 41526802 41527378 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21760455
chr17 41526812 41527032 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760456
chr17 41526830 41526851 ZNF263 JASPAR yes 54348107
chr17 41526836 41527340 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21760457
chr17 41526844 41526854 TBR1 JASPAR yes 54348109
chr17 41526846 41526855 ZEB1 JASPAR yes 54348110
chr17 41526846 41526858 PKNOX1 JASPAR yes 54348111
chr17 41526846 41526858 PKNOX2 JASPAR yes 54348112
chr17 41526849 41526854 USF2 TRANSFAC yes 54348113
Genes associated with rs143313774[chr17:41526850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More