EnhancerDB
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  3. rs143323970[chr12:52594656]
Enhancers that have rs143323970[chr12:52594656]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143323970[chr12:52594656]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52594289 52594859 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546609
chr12 52594289 52594859 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033586
chr12 52594322 52594792 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546610
chr12 52594322 52594792 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033588
chr12 52594322 52594827 GATA3 UCSC Txn Factor no Conserved 108033589
chr12 52594383 52594879 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546611
chr12 52594383 52594879 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033590
chr12 52594396 52594749 GATA2 UCSC Txn Factor no Conserved 108033591
chr12 52594641 52594656 TFAP2C JASPAR yes 120927011
chr12 52594642 52594657 TFAP2A JASPAR yes 120927012
chr12 52594654 52594673 CTCF JASPAR yes 120927014
Genes associated with rs143323970[chr12:52594656], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More