EnhancerDB
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  3. rs143358402[chr1:224385627]
Enhancers that have rs143358402[chr1:224385627]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs143358402[chr1:224385627]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224385620 224385630 SREBF1 JASPAR yes 35692647
chr1 224385620 224385630 SREBF2 JASPAR yes 35692648
chr1 224385621 224385629 MGA JASPAR yes 35692649
Genes associated with rs143358402[chr1:224385627], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More