-
Home
- SNP
- rs143393274[chr3:16550441]
Enhancers that have rs143393274[chr3:16550441]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr3 |
16543630 |
16553835 |
enh87227 |
|
|
| chr3 |
16550067 |
16550455 |
vista40161 |
|
|
Transcript factors that have rs143393274[chr3:16550441]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr3
|
16548942
|
16558839
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108528470
|
|
|
chr3
|
16548942
|
16558839
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108528471
|
|
|
chr3
|
16548942
|
16558839
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108528472
|
|
|
chr3
|
16548942
|
16558839
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108528473
|
|
|
chr3
|
16548942
|
16558839
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108528474
|
|
|
chr3
|
16548942
|
16558839
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108528475
|
|
|
chr3
|
16548942
|
16558839
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108528476
|
|
|
chr3
|
16549978
|
16550493
|
EBF1
|
UCSC Txn Factor
|
no
|
Conserved
|
108528477
|
|
|
chr3
|
16550038
|
16550610
|
NFIC
|
UCSC Txn Factor
|
no
|
Conserved
|
108528478
|
|
|
chr3
|
16550149
|
16550606
|
RUNX3
|
UCSC Txn Factor
|
no
|
Conserved
|
108528479
|
|
|
chr3
|
16550431
|
16550443
|
HES5
|
JASPAR
|
yes
|
|
736059
|
|
|
chr3
|
16550431
|
16550443
|
HES5
|
JASPAR
|
yes
|
|
70947000
|
|
|
chr3
|
16550432
|
16550442
|
CLOCK
|
JASPAR
|
yes
|
|
736060
|
|
|
chr3
|
16550432
|
16550442
|
HEY1
|
JASPAR
|
yes
|
|
736061
|
|
|
chr3
|
16550432
|
16550442
|
HEY2
|
JASPAR
|
yes
|
|
736062
|
|
|
chr3
|
16550432
|
16550442
|
MAX
|
JASPAR
|
yes
|
|
736063
|
|
|
chr3
|
16550432
|
16550442
|
CLOCK
|
JASPAR
|
yes
|
|
70947001
|
|
|
chr3
|
16550432
|
16550442
|
HEY1
|
JASPAR
|
yes
|
|
70947002
|
|
|
chr3
|
16550432
|
16550442
|
HEY2
|
JASPAR
|
yes
|
|
70947003
|
|
|
chr3
|
16550432
|
16550442
|
MAX
|
JASPAR
|
yes
|
|
70947004
|
|
|
chr3
|
16550433
|
16550443
|
MAX
|
JASPAR
|
yes
|
|
736064
|
|
|
chr3
|
16550433
|
16550443
|
MAX
|
JASPAR
|
yes
|
|
70947005
|
|
|
chr3
|
16550434
|
16550441
|
USF1
|
JASPAR
|
yes
|
|
736068
|
|
|
chr3
|
16550434
|
16550441
|
USF1
|
JASPAR
|
yes
|
|
70947009
|
|
|
chr3
|
16550437
|
16550451
|
TLX1
|
JASPAR
|
yes
|
|
736069
|
|
|
chr3
|
16550437
|
16550451
|
TLX1
|
JASPAR
|
yes
|
|
70947010
|
|
|
chr3
|
16550438
|
16550452
|
TLX1
|
JASPAR
|
yes
|
|
736070
|
|
|
chr3
|
16550438
|
16550452
|
TLX1
|
JASPAR
|
yes
|
|
70947011
|
|
Genes associated with rs143393274[chr3:16550441], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |