EnhancerDB
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  3. rs143405545[chr1:203617636]
Enhancers that have rs143405545[chr1:203617636]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203594185 203628195 enh12562
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 203617500 203617713 vista4650
VISTA
Transcript factors that have rs143405545[chr1:203617636]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203617632 203617645 SMAD2 JASPAR yes 34650693
chr1 203617632 203617645 SMAD2 JASPAR yes 118436608
Genes associated with rs143405545[chr1:203617636], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More